CDS

Accession Number TCMCG047C28330
gbkey CDS
Protein Id GFQ06896.1
Location complement(join(10326..11078,11168..11239,11596..11644,11959..11998,12060..12096,12193..12273,13004..13294))
Organism Phtheirospermum japonicum
locus_tag PHJA_002833600

Protein

Length 440aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01001334.1
Definition pre-mRNA-splicing factor 38b [Phtheirospermum japonicum]
Locus_tag PHJA_002833600

EGGNOG-MAPPER Annotation

COG_category S
Description PRP38 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12850        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010226        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGAGATAAAGTCATCAGGGAGACCAATTGATCAATTGTTGGAGAAGGTTCTGTGCATGAATATTCTTTCTTCTGATTACTTTCGAGATCTTTTGAGATTGAAAACATATCACGAAGTGATTGATGAGATCTATGTTACCGTCACACACGTGGAGCCATGGATGACTGGTAACTGTCGGGGACCGTCAACTGCATTCTGTCTTCTTTACAAATTTTTCACCATGAAGCTCACAGTCAAACAGATGCATGGCCTGTTGAAGCATCCGGATTCTCCTTACATAAGAGCGGTTGGGTTTCTTTACCTAAGGTATGTAGCAGATCCAAAGACGTTATGGAGTTGGTATGAACCATACCTAAAAGATGACGAGCTGTGGCACTTCATGAAGCAGAATGAACAAGTGCACGAAGCTGGCAATGTGCTTACTGTTATATTCAAAAGTGTTAGGATGGATGGATTTTACAGTTCCTCGTGCATCAGCATGATTCCTGTGAAGGAATTTTCTCCTGGTTCCAGTGGCAGAATGACTACAATGGGTGTTTACGTGCGTGATTTGCTTCTTGGACAGTACTACTTTGACACACTCTTCCCCCGTATCCCTGTTCCCGTCATGCGAACTATCGTATCCAGTCTCGAAAGCATGAAATTGCCTACAAAGCACTGCGGGGTTACTGGTGAGACAACCCGTGGGTCCGAGGAGACCGCCAGAAGACCCCCTTCTGTCAAAGCCGCCCTTTCCGTCTCCTTTGGTCAGCGTGCTCCTCATCGCGCGTCGACTAGAGATTCATCCCCCGTTAGACGCACAATCGCTCCATCTTACGACAGGGATGACGATTCGCGACGGTCCCCCAATCGTCGCCGCAGCCAGAGTCGAGACTTATCCGATCGAGAATATTCGGACAGAGAAAGAGACAGACAGAGAGAGAGGGAAAGAAGGGACAGAGAAAGAGACAGGGATCGAGATAGAGATAGAGATAGGAGGTACGATTATGATAGGAGGTCCCGAGATAGCTATAGAAGGGATTATTATGATGGGAGAGACCGTGACCAACACTATCATGGGTCCCGTCGGAGTCGAAGTAGGAGCAGGAGTCGAAGTCAAAGCGCTTATGACCGAAGTACTGGACAGGATCAAAATCGTGCTAGTCCGTCTAGAAATGGAAACATGGAAAAGACATCTGCCTCTAGTAATCTTGCCAAGCTTAAAGATCTATATGGGGACTTAGGCAGTAAAAACGAGGATACGAGCAAGGACAAGGGCTCGAACCAGCCAGGTGGTACGGAGGAGGTGATCAGACTTGGTGGTTCTTCGTGGAGGTAA
Protein:  
MAEIKSSGRPIDQLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYVTVTHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYVADPKTLWSWYEPYLKDDELWHFMKQNEQVHEAGNVLTVIFKSVRMDGFYSSSCISMIPVKEFSPGSSGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRTIVSSLESMKLPTKHCGVTGETTRGSEETARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIAPSYDRDDDSRRSPNRRRSQSRDLSDREYSDRERDRQRERERRDRERDRDRDRDRDRRYDYDRRSRDSYRRDYYDGRDRDQHYHGSRRSRSRSRSRSQSAYDRSTGQDQNRASPSRNGNMEKTSASSNLAKLKDLYGDLGSKNEDTSKDKGSNQPGGTEEVIRLGGSSWR